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Identification of novel Fc-interacting proteins involved in the inflammation induced by internalizing anti-DNA antibody

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dc.contributor.author김, 민재-
dc.date.accessioned2021-01-06T02:34:50Z-
dc.date.available2021-01-06T02:34:50Z-
dc.date.issued2020-
dc.identifier.urihttp://repository.ajou.ac.kr/handle/201003/19243-
dc.description.abstract비공개-
dc.description.tableofcontentsABSTRACT i
TABLE OF CONTENTS ii
LIST OF FIGURES iii
LIST OF TABLES iv
I. INTRODUCTION 1
II. MATERIALS AND METHODS 8
A. Cell culture 8
B. Construction of expression vectors and peptide 8
C. Protein preparation using HEK293F cell 9
D. Antibodies 9
E. Lentiviral vector construction 10
F. Establishment of stable cell lines 11
G. Tandem affinity purification (TAP) 11
H. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and in-gel tryptic digestion 12
I. Liquid chromatography-mass spectrometry/mass spectrometry (LC-MS/MS) analysis 13
J. Protein Microarray 13
K. Enzyme-Linked Immunosorbent assay (ELISA) 14
L. Confocal microscopy 14
M. Western blotting 15
N. Immunoprecipitation (IP) 15
O. Quantitative RT-PCR (qRT-PCR) 16
P. In vivo ubiquitination assay 17
Q. Statistical analysis 17
III. RESULTS 18
A. Production of IL-8 and TNF-α induced by cell-internalizable anti-DNA IgG is not mediated by TRIM21-signaling pathway. 18
B. Tandem affinity purification (TAP) is used as a method for the identification of novel Fc-interacting proteins in cell cytosol. 23
C. Extracellular tandem affinity purification (ExTAP) is designed to preserve the structural integrity of IgG-Fc used for identification of novel Fc-receptors in cell cytosol. 28
D. Human IgG Fc-interacting proteins are identified by three independent TAP assays coupled with mass-spectrometry analysis. 33
E. The binding between Fc-interacting proteins and purified IgCw-γκ is confirmed in HEK293T cells. 37
F. The binding between Fc-interacting proteins and internalizing 3D8 IgG is confirmed in HEK293T cells. 41
G. Production of IL-8 and TNF-α response to treatment of 3D8 IgG is reduced by knockdown of Fc-interacting proteins in THP-1 cells. 44
H. Ubiquitination of cell-internalizable 3D8 IgG is not mediated by TRIM21 in THP-1 cells. 48
I. Ubiquitination of 3D8 IgG is increased by TRIM21 knockdown in THP-1 cells. 53
J. β-TrCP2 ubiquitinates 3D8 IgG. 57
IV. DISCUSSION 60
V. CONCLUSION 64
REFERENCES 65
국문요약 72
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dc.language.isoen-
dc.titleIdentification of novel Fc-interacting proteins involved in the inflammation induced by internalizing anti-DNA antibody-
dc.title.alternative세포 유입성 항-DNA 항체 매개의 염증 반응을 조절하는 새로운 Fc 결합 단백질 규명-
dc.typeThesis-
dc.identifier.urlhttp://dcoll.ajou.ac.kr:9080/dcollection/jsp/common/DcLoOrgPer.jsp?sItemId=000000029530-
dc.subject.keywordAnti-DNA antibody-
dc.subject.keywordTRIM21-
dc.subject.keywordβ-TrCP2-
dc.subject.keywordTandem affinity purification(TAP)-
dc.subject.keyword항-DNA 항체-
dc.subject.keyword일렬 친화도 정제-
dc.description.degreeDoctor-
dc.contributor.department대학원 의생명과학과-
dc.contributor.affiliatedAuthor김, 민재-
dc.date.awarded2020-
dc.type.localTheses-
dc.citation.date2020-
dc.embargo.liftdate9999-12-31-
dc.embargo.terms9999-12-31-
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